journal article·2025-07-04

Integration of Peptide Array Screening and Machine Learning for the Discovery of Peptides Directing Triangular Gold Nanoplate Formation

Shogo Saito, Riona Oka, Tomoya Ikuta, Yuya Abe, Yonghyun Choi, Takumi Ohashi, Kevin Critchley, Jonghoon Choi, Stephen D. Evans, Masayoshi Tanaka, Mina Okochi

ACS Applied Nano Materials· Volume 8· Issue 26
Publisher page

Abstract

Peptide-mediated one-pot synthesis of gold nanoparticles (AuNPs) with diverse morphologies has been explored using tetrachloroauric acid ions at room temperature. Among these, triangular gold nanoplates (AuNPLs) are particularly notable for their unique optical properties and potential applications in photothermal therapy. In this study, we integrated peptide array screening with machine learning to identify peptides and evaluate their AuNP synthesis potential. By analyzing the color characteristics of AuNPs synthesized by each peptide on the array, we trained machine learning models to predict biomineralization efficiency based on peptide sequences and the resulting AuNP optical characteristics. This approach led to the discovery of four peptide sequences, among which the BR2–3 peptide (RWGGGIGGWN) facilitated the formation of uniform triangular AuNPLs with a yield of 33%. While the overall synthesis efficiency remained comparable to previously identified peptides, our findings broaden the scope of peptide sequences that can direct controlled AuNPL formation, offering possibilities for tailored AuNP synthesis. Over 95% of these nanoparticles (triangular and decahedral) fell within the 10–100 nm size range, making them highly suitable for drug delivery systems (DDS) and other biomedical applications. AuNPs synthesized with BR2–3 exhibited higher cellular uptake compared to those synthesized with other peptides, suggesting enhanced internalization potential. This study demonstrates the feasibility of peptide array-based, machine learning-assisted peptide screening for the biomineralization of triangular AuNPLs, emphasizing their applicability in biosensing and biomedicine.
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Research context

OpenAlex topics: Diatoms and Algae Research · Advanced biosensing and bioanalysis techniques · Advanced Proteomics Techniques and Applications

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

School of Materials and Chemical Technology, Institute of Science Tokyo, 2-12-1, O-okayama, Meguro-ku, Tokyo 152-8550, Japan

School of Materials and Chemical Technology, Institute of Science Tokyo, 4259 Nagatsuta-cho, Midori-ku, Yokohama-shi, Kanagawa 226-8501, Japan

School of Integrative Engineering

Chung-Ang University

School of Environment and Society, Institute of Science Tokyo, 2-12-1, O-okayama, Meguro-ku, Tokyo 152-8550, Japan

School of Physics and Astronomy

University of Leeds

Funding

Ministry of Education, Culture, Sports, Science and Technology · Japan Society for the Promotion of Science

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