journal article·2021-06-25

Detection of SARS-CoV-2 Using Antibody–Antigen Interactions with Graphene-Based Nanomechanical Resonator Sensors

Javad Payandehpeyman, Neda Parvini, Kambiz Moradi, Nima Hashemian

ACS Applied Nano Materials· Volume 4· Issue 6
Publisher page

Abstract

Coronavirus disease 2019 (COVID-19) is a newly emerging human infectious disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Early diagnosis is essential to reducing the transmission rate and mortality of COVID-19. PCR-based tests are the gold standard for the confirmation of COVID-19, but immunological tests for SARS-CoV-2 detection are widely available and play an increasingly important role in the diagnosis of COVID-19. Nanomechanical sensors are biosensors that work based on a change in the mechanical response of the system when a foreign object is added. In this paper, a graphene-based nanoresonator sensor for SARS-CoV-2 detection was introduced and analyzed by using the finite element method (FEM). The sensor was simulated by coating a single-layer graphene sheet (SLGS) with a specific antibody against SARS-CoV-2 Spike S1 antigen. In the following, the SARS-CoV-2 viruses were randomly distributed on the SLGSs, and essential design parameters of the nanoresonator, including frequency shift and relative frequency shift, were evaluated. The effect of the SLGS size, aspect ratio and boundary conditions, antibody concentration, and the number of viruses variation on the frequency shift and relative frequency shift were investigated. The results revealed that, by proper selection of the nanoresonator design variables, a good sensitivity index is achievable for identifying the SARS-CoV-2 virus even when the number of the viruses are less than 10 per test. Eventually, according to the simulation results, by using SLGS geometry determination, an analytical relationship is presented to predict the limit of detection (LOD) of the sensor with the required sensitivity index. The results can be applied in designing and fabricating specific graphene-based nanoresonator sensors for SARS-CoV-2.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: SARS-CoV-2 and COVID-19 Research · SARS-CoV-2 detection and testing · Nanowire Synthesis and Applications

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Department of Mechanical Engineering, Hamedan University of Technology, P.O. Box 65169-13733, Hamedan, Iran

Cellular and Molecular Research Center, Research Institute for Health Development, Kurdistan University of Medical Sciences, P.O. Box 66177-13446, Sanandaj, Iran

Department of Stem Cells and Developmental Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, P.O. Box 16656-59911, Tehran, Iran

Faculty of Biology and Center of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, P.O. Box 14179-35840, Tehran, Iran

References (53)

Show source-provided references
1. 10.1016/S0140-6736(20)30183-510.1016/S0140-6736(20)30183-5 ↗
2. 10.1016/j.jare.2020.03.00510.1016/j.jare.2020.03.005 ↗
3. 10.1016/j.cca.2020.06.04510.1016/j.cca.2020.06.045 ↗
4. 10.1056/NEJMoa200101710.1056/NEJMoa2001017 ↗
5. 10.1001/jama.2020.256510.1001/jama.2020.2565 ↗
6. Coronavirus Disease 2019 (COVID-19). World Health Organization Situation Report, March 2021.
7. 10.3389/fmed.2020.0031110.3389/fmed.2020.00311 ↗
8. 10.1080/22221751.2020.173736410.1080/22221751.2020.1737364 ↗
9. 10.1016/j.it.2020.04.00810.1016/j.it.2020.04.008 ↗
10. 10.1016/j.jmii.2020.03.02210.1016/j.jmii.2020.03.022 ↗
11. 10.1016/j.cell.2020.02.05810.1016/j.cell.2020.02.058 ↗
12. 10.1007/s11481-020-09944-510.1007/s11481-020-09944-5 ↗
13. 10.1016/j.compbiomed.2020.10374910.1016/j.compbiomed.2020.103749 ↗
14. 10.1016/j.meegid.2020.10438410.1016/j.meegid.2020.104384 ↗
15. 10.1016/j.cell.2020.06.04310.1016/j.cell.2020.06.043 ↗
16. 10.1080/22221751.2020.182389010.1080/22221751.2020.1823890 ↗
17. 10.1007/BF0225655410.1007/BF02256554 ↗
18. 10.1093/clinchem/hvaa02910.1093/clinchem/hvaa029 ↗
19. 10.1016/j.rbmo.2020.06.00110.1016/j.rbmo.2020.06.001 ↗
20. 10.1063/5.002155410.1063/5.0021554 ↗
21. 10.1021/acscentsci.0c0050110.1021/acscentsci.0c00501 ↗
22. Maidin, N. N. M.; Rahim, R. A.; Halim, N. H. A.; Abidin, A. S. Z.; Ahmad, N. A.; Lockman, Z. Interaction of graphene electrolyte gate field-effect transistor for detection of cortisol biomarker; AIP Publishing, 2018; p 020022.10.1063/1.5080835 ↗
23. 10.1021/acsnano.0c0282310.1021/acsnano.0c02823 ↗
24. 10.1016/j.ijantimicag.2020.10605410.1016/j.ijantimicag.2020.106054 ↗
25. 10.1038/srep3110310.1038/srep31103 ↗
26. 10.1016/B978-0-12-818821-7.00004-X10.1016/B978-0-12-818821-7.00004-X ↗
27. 10.1016/j.aca.2018.04.03210.1016/j.aca.2018.04.032 ↗
28. 10.1016/j.commatsci.2013.10.01010.1016/j.commatsci.2013.10.010 ↗
29. 10.1016/j.physe.2018.09.02710.1016/j.physe.2018.09.027 ↗
30. 10.1021/acssensors.0c0196110.1021/acssensors.0c01961 ↗
31. 10.1016/j.nantod.2020.10088310.1016/j.nantod.2020.100883 ↗
32. 10.3390/electronics404072310.3390/electronics4040723 ↗
33. 10.1016/j.ijengsci.2018.09.00110.1016/j.ijengsci.2018.09.001 ↗
34. 10.1016/j.pmatsci.2017.07.00410.1016/j.pmatsci.2017.07.004 ↗
35. 10.1038/nnano.2009.26710.1038/nnano.2009.267 ↗
36. 10.1016/j.ijsolstr.2007.04.02910.1016/j.ijsolstr.2007.04.029 ↗
37. 10.1103/PhysRevB.80.11340510.1103/PhysRevB.80.113405 ↗
38. 10.1088/2053-1591/aa576a10.1088/2053-1591/aa576a ↗
39. 10.1016/j.commatsci.2012.08.00210.1016/j.commatsci.2012.08.002 ↗
40. 10.1016/j.compstruct.2018.06.07610.1016/j.compstruct.2018.06.076 ↗
41. 10.1016/j.sna.2021.11274210.1016/j.sna.2021.112742 ↗
42. 10.1002/adma.20200544810.1002/adma.202005448 ↗
43. 10.1038/ni.262110.1038/ni.2621 ↗
44. 10.7326/M20-119010.7326/M20-1190 ↗
45. 10.1214/aoms/117769783310.1214/aoms/1177697833 ↗
46. 10.1088/0957-4484/16/4/03710.1088/0957-4484/16/4/037 ↗
47. 10.1166/jnn.2007.86210.1166/jnn.2007.862 ↗
48. 10.1109/66.14980210.1109/66.149802 ↗
49. 10.1093/cid/ciaa34510.1093/cid/ciaa345 ↗
50. 10.1155/2019/645186110.1155/2019/6451861 ↗
51. Blevins, R. D. Formulas for Dynamics, Acoustics and Vibration; John Wiley & Sons, Ltd.: Chichester, U.K., 2015; pp 1–448.10.1002/9781119038122 ↗
52. 10.1038/nnano.2013.23210.1038/nnano.2013.232 ↗
53. 10.1021/acs.nanolett.8b0203610.1021/acs.nanolett.8b02036 ↗