journal article·2019

Optimal ligand–receptor binding for highly efficient capture of vesicles in nanofluidic transportation

Ziyang Xu, Guolong Zhu, Pengyu Chen, Xiaobin Dai, Li-Tang Yan

Nanoscale· Volume 11· Issue 46
Publisher page

Abstract

Optimizing ligand-receptor binding is essential for exploiting advanced biomedical applications from targeting drug delivery to biosensing. A key challenge is how optimized ligand-receptor binding can be realized during the transport of ligand-modified soft materials through a nanofluidic channel. Here, by combining computer simulations and theoretical analysis, we report that the ligand-receptor binding and resulting capture probability of ligand-functionalized vesicles nonmonotonically depend on their some intrinsic properties, e.g., chain stiffness and vesicle rigidity, during their transport through a nanochannel with imposed Poiseuille flow. Particularly, we find that the systems with semiflexible ligand and receptor chains possess the optimal ligand-receptor binding and capture probability. An analytical model of the blob theory is developed to capture the simulation results quantitatively, leading to a mechanistic interpretation of the optimal vesicle capture based on the conformational-entropy effect. Examination of the detailed dynamics reveals the active rearrangement of ligand-receptor binding during the transport process. Furthermore, the hairy vesicle with moderate rigidity is found to display an enhanced capture probability superior to that of both its soft and hard counterparts, which is rationalized by the faster and more periodic tumbling motion of the semi-rigid vesicle. Our findings highlight that precise control of the intrinsic properties of ligands and receptors as well as the vesicle rigidity can be a versatile strategy in optimizing the ligand-receptor binding in nanofluidic transportation towards advantageous biomedical applications.
Source: openalex_inverted_index · Quality: candidate unverified · Source record ↗

Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · RNA Interference and Gene Delivery · Nanoparticle-Based Drug Delivery

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

State Key Laboratory of Chemical Engineering

Department of Chemical Engineering

Tsinghua University

Beijing 100084

P. R. China

Funding

Ministry of Science and Technology of the People's Republic of China · National Natural Science Foundation of China

References (59)

Show source-provided references
1. Stewart · Nature · 2016 · 538 · 18310.1038/nature19764 ↗
2. Visvader · Nat. Rev. Cancer · 2008 · 8 · 75510.1038/nrc2499 ↗
3. Hanahan · Cell · 2011 · 144 · 64610.1016/j.cell.2011.02.013 ↗
4. Mura · Nat. Mater. · 2013 · 12 · 99110.1038/nmat3776 ↗
5. Caplan · Ann. Biomed. Eng. · 2005 · 33 · 111310.1007/s10439-005-5779-1 ↗
6. Bartlett · Proc. Natl. Acad. Sci. U. S. A. · 2007 · 104 · 1554910.1073/pnas.0707461104 ↗
7. Wilhelm · Nat. Rev. Mater. · 2016 · 1 · 1601410.1038/natrevmats.2016.14 ↗
8. Baker · Nature · 2010 · 464 · 122510.1038/4641225a ↗
9. Davis · Nature · 2010 · 464 · 106710.1038/nature08956 ↗
11. Macfarlane · Science · 2011 · 334 · 20410.1126/science.1210493 ↗
12. W. Cai , Engineering in Translational Medicine , Springer-Verlag , London , 201410.1007/978-1-4471-4372-7 ↗
13. Angioletti-Uberti · Phys. Rev. Lett. · 2017 · 118 · 06800110.1103/PhysRevLett.118.068001 ↗
14. Martinez-Veracoechea · Proc. Natl. Acad. Sci. U. S. A. · 2011 · 108 · 1096310.1073/pnas.1105351108 ↗
15. Dubacheva · Proc. Natl. Acad. Sci. U. S. A. · 2015 · 112 · 557910.1073/pnas.1500622112 ↗
16. Angioletti-Uberti · Phys. Rev. Lett. · 2014 · 113 · 12830310.1103/PhysRevLett.113.128303 ↗
17. van der Meulen · J. Am. Chem. Soc. · 2013 · 135 · 1512910.1021/ja406226b ↗
18. Curk · Nano Lett. · 2018 · 18 · 535010.1021/acs.nanolett.8b00786 ↗
19. Dubacheva · J. Am. Chem. Soc. · 2014 · 136 · 172210.1021/ja411138s ↗
20. M. Rubinstein and R. H.Colby , Polymer Physics , Oxford University Press , Oxford , 200310.1093/oso/9780198520597.001.0001 ↗
21. Lee · Nat. Mater. · 2016 · 15 · 85610.1038/nmat4610 ↗
22. Park · Nat. Mater. · 2016 · 15 · 79210.1038/nmat4586 ↗
23. Chen · Sci. Adv. · 2019 · 5 · eaaw319210.1126/sciadv.aaw3192 ↗
24. Petros · Nat. Rev. Drug Discovery · 2010 · 9 · 61510.1038/nrd2591 ↗
25. Mitragotri · Nat. Mater. · 2009 · 8 · 1510.1038/nmat2344 ↗
26. Steeg · Nat. Med. · 2006 · 12 · 89510.1038/nm1469 ↗
27. Nagrath · Nature · 2007 · 450 · 123510.1038/nature06385 ↗
28. Stott · Proc. Natl. Acad. Sci. U. S. A. · 2010 · 107 · 1839210.1073/pnas.1012539107 ↗
29. Ozkumur · Sci. Transl. Med. · 2013 · 5 · 179ra4710.1126/scitranslmed.3005616 ↗
30. Wang · Angew. Chem., Int. Ed. · 2009 · 48 · 897010.1002/anie.200901668 ↗
31. Parolini · Nat. Commun. · 2015 · 6 · 594810.1038/ncomms6948 ↗
32. Parolini · ACS Nano · 2016 · 10 · 239210.1021/acsnano.5b07201 ↗
33. Hadorn · Langmuir · 2013 · 29 · 1530910.1021/la402621r ↗
34. Banga · J. Am. Chem. Soc. · 2014 · 136 · 986610.1021/ja504845f ↗
35. Leunissen · Nat. Mater. · 2009 · 8 · 59010.1038/nmat2471 ↗
36. Hoogerbrugge · Europhys. Lett. · 1992 · 19 · 15510.1209/0295-5075/19/3/001 ↗
37. Fedosov · J. Comput. Phys. · 2008 · 227 · 254010.1016/j.jcp.2007.11.009 ↗
38. Chu · ACS Nano · 2017 · 11 · 666110.1021/acsnano.7b00753 ↗
39. Xu · Adv. Theory Simul. · 2019 · 2 · 180016010.1002/adts.201800160 ↗
40. Masoud · Chem. Commun. · 2011 · 47 · 47210.1039/C0CC02165B ↗
41. Pivkin · J. Comput. Phys. · 2005 · 207 · 11410.1016/j.jcp.2005.01.006 ↗
42. Salib · ACS Nano · 2013 · 7 · 122410.1021/nn304622f ↗
43. Alexeev · Phys. Rev. Lett. · 2006 · 96 · 14810310.1103/PhysRevLett.96.148103 ↗
44. Zhong · Invest. Ophthalmol. Visual Sci. · 2011 · 52 · 415110.1167/iovs.10-6940 ↗
45. Xu · Small · 2018 · 13 · 160315510.1002/smll.201603155 ↗
46. Cheng · ACS Nano · 2011 · 5 · 110210.1021/nn102754g ↗
47. Zhu · Acc. Chem. Res. · 2018 · 51 · 90010.1021/acs.accounts.8b00001 ↗
48. Huang · ACS Nano · 2018 · 12 · 672510.1021/acsnano.8b01842 ↗
49. Sheiko · Nat. Mater. · 2013 · 12 · 73510.1038/nmat3651 ↗
50. P. G. de Gennes , Scaling Concepts in Polymer Physics , Cornell University Press , Ithaca , 1979
51. Daoud · J. Phys. · 1982 · 43 · 53110.1051/jphys:01982004303053100 ↗
52. Li · J. Am. Chem. Soc. · 2013 · 135 · 853510.1021/ja312644h ↗
53. Zhu · ACS Nano · 2018 · 12 · 946710.1021/acsnano.8b04753 ↗
54. Chou · Nat. Nanotechnol. · 2014 · 9 · 14810.1038/nnano.2013.309 ↗
55. Yu · Proc. Natl. Acad. Sci. U. S. A. · 2019 · 116 · 536210.1073/pnas.1818924116 ↗
56. Yu · Nat. Commun. · 2018 · 9 · 260710.1038/s41467-018-05061-3 ↗
57. Yan · ACS Nano · 2010 · 4 · 91310.1021/nn901739v ↗
58. Groot · J. Chem. Phys. · 1997 · 107 · 442310.1063/1.474784 ↗
59. Micka · J. Phys.: Condens. Matter · 1996 · 8 · 9463