Heterogeneous nanozymatic activity of Hf oxo-clusters embedded in a metal–organic framework towards peptide bond hydrolysis
Source abstract
Abstract
Materials with enzyme-like activities and proteolytic potential are emerging as a robust and effective alternative to natural enzymes. Herein, a Hf6O8-based NU-1000 metal organic framework (Hf-MOF) is shown to act as a heterogeneous catalyst for the hydrolysis of peptide bonds under mild conditions. In the presence of Hf-MOF, a glycylglycine model dipeptide was hydrolysed with a rate constant of kobs = 8.33 × 10-7 s-1 (half-life (t1/2) of 231 h) at 60 °C and pD 7.4, which is significantly faster than the uncatalyzed reaction. Other Gly-X peptides (X = Ser, Asp, Ile, Ala, and His) were also smoothly hydrolysed under the same conditions with similar rates, except for the faster reactions observed for Gly-His and Gly-Ser. Moreover, the Hf6O8-based NU-1000 MOF also exhibits a high selectivity in the cleavage of a protein substrate, hen egg white lysozyme (HEWL). Our results suggest that embedding Hf6O8 oxo-clusters is an efficient strategy to conserve the hydrolytic activity while smoothing the strong substrate adsorption previously observed for a discrete Hf oxo-cluster that hindered further development of its proteolytic potential. Furthermore, comparison with isostructural Zr-NU-1000 shows that although the Hf variant afforded the same cleavage pattern towards HEWL but slightly slower reaction rates, it exhibited a larger stability window and a better recyclability profile. The results suggest that these differences originate from the intrinsic differences between HfIV and ZrIV centers, and from the lower surface area of Hf-NU-1000 in comparison to Zr-NU-1000.
Source: europepmc · Quality: candidate unverified · Source record ↗
Research context
OpenAlex topics: Advanced Nanomaterials in Catalysis · Metal-Organic Frameworks: Synthesis and Applications · Nanocluster Synthesis and Applications
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
Affiliations
Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
Funding
KU Leuven · Fonds Wetenschappelijk Onderzoek
References (41)
Show source-provided references
1. Furukawa · Science · 2013 · 341 · 123044410.1126/science.1230444 ↗
2. Li · Mater. Today · 2018 · 21 · 10810.1016/j.mattod.2017.07.006 ↗
3. Kreno · Chem. Rev. · 2012 · 112 · 110510.1021/cr200324t ↗
4. Lee · Chem. Soc. Rev. · 2009 · 38 · 145010.1039/b807080f ↗
5. Dhakshinamoorthy · Chem. Soc. Rev. · 2018 · 47 · 813410.1039/C8CS00256H ↗
6. Liu · Chem. Soc. Rev. · 2014 · 43 · 601110.1039/C4CS00094C ↗
7. Kirchon · Chem. Soc. Rev. · 2018 · 47 · 861110.1039/C8CS00688A ↗
8. Huang · Chem. Rev. · 2019 · 119 · 435710.1021/acs.chemrev.8b00672 ↗
9. Gkaniatsou · Mater. Horizons · 2017 · 4 · 5510.1039/C6MH00312E ↗
10. Qin · Chem. Commun. · 2018 · 54 · 423110.1039/C7CC09173G ↗
11. Bour · Chem. Sci. · 2020 · 11 · 172810.1039/C9SC06418D ↗
12. Chen · Dalton Trans. · 2016 · 45 · 974410.1039/C6DT00325G ↗
13. Abdelhamid · J. Mater. Chem. B · 2020 · 8 · 754810.1039/D0TB00894J ↗
14. Kirlikovali · ACS Appl. Mater. Interfaces · 2020 · 12 · 1470210.1021/acsami.9b20154 ↗
15. Zammataro · Catalysts · 2020 · 10 · 110.3390/catal10080881 ↗
16. Zhong · Anal. Methods · 2021 · 13 · 86210.1039/D0AY02193H ↗
17. Li · Sci. Rep. · 2014 · 4 · 39
18. Ly · J. Am. Chem. Soc. · 2018 · 140 · 632510.1021/jacs.8b01902 ↗
19. Ly · ACS Appl. Nano Mater. · 2020 · 3 · 893110.1021/acsanm.0c01688 ↗
20. Loosen · Chem. Sci. · 2020 · 11 · 666210.1039/D0SC02136A ↗
21. Tsiatsiani · FEBS J. · 2015 · 282 · 261210.1111/febs.13287 ↗
22. Swaney · J. Proteome Res. · 2010 · 9 · 132310.1021/pr900863u ↗
23. Wezynfeld · Coord. Chem. Rev. · 2016 · 327–328 · 16610.1016/j.ccr.2016.02.009 ↗
24. Mahesh · Molecules · 2018 · 23 · 110.3390/molecules23102615 ↗
25. Allen · Int. J. Pept. Protein Res. · 1996 · 48 · 26510.1111/j.1399-3011.1996.tb00840.x ↗
26. G.Allen , in Met Ions Biol Syst , CRC Press , Boca Raton, Florida , 38th edn, 2001 , pp. 197–212
27. de Azambuja · Acc. Chem. Res. · 2021 · 54 · 167310.1021/acs.accounts.0c00666 ↗
28. Grant · Curr. Org. Chem. · 2006 · 10 · 103510.2174/138527206777435535 ↗
29. Vandebroek · Chem. – Eur. J. · 2018 · 24 · 1009910.1002/chem.201802052 ↗
30. Anyushin · Front. Chem. · 2018 · 6 · 110.3389/fchem.2018.00614 ↗
31. Moons · Angew. Chem. · 2020 · 59 · 909410.1002/anie.202001036 ↗
32. Beyzavi · J. Am. Chem. Soc. · 2014 · 136 · 1586110.1021/ja508626n ↗
33. García-García · Isr. J. Chem. · 2018 · 58 · 106210.1002/ijch.201800099 ↗
34. Rimoldi · ACS Catal. · 2017 · 7 · 99710.1021/acscatal.6b02923 ↗
35. Nguyen · J. Catal. · 2019 · 374 · 11010.1016/j.jcat.2019.04.023 ↗
36. Li · Chem. Commun. · 2015 · 51 · 1092510.1039/C5CC03398E ↗
37. Radzicka · J. Am. Chem. Soc. · 1996 · 118 · 610510.1021/ja954077c ↗
38. Conic · Phys. Chem. Chem. Phys. · 2020 · 22 · 2513610.1039/D0CP04775A ↗
39. Ho · Inorg. Chem. · 2012 · 51 · 884810.1021/ic300761g ↗
40. Mihaylov · Org. Biomol. Chem. · 2014 · 12 · 139510.1039/c3ob42372g ↗
41. Counterman · J. Am. Chem. Soc. · 1999 · 121 · 403110.1021/ja984344p ↗