journal article·2024-04-02

Kinetic Model for the Heterogeneous Biocatalytic Reactions Using Tethered Cofactors

Rowan McDonough, Charlotte C. Williams, Carol J. Hartley, Nigel French, Colin Scott, David A. Lewis

Langmuir· Volume 40· Issue 13
Publisher page

Abstract

Understanding the mechanism of interfacial enzyme kinetics is critical to the development of synthetic biological systems for the production of value-added chemicals. Here, the interfacial kinetics of the catalysis of β-nicotinamide adenine dinucleotide (NAD + )-dependent enzymes acting on NAD + tethered to the surface of silica nanoparticles (SiNPs) has been investigated using two complementary and supporting kinetic approaches: enzyme excess and reactant (NAD + ) excess. Kinetic models developed for these two approaches characterize several critical reaction steps including reversible enzyme adsorption, complexation, decomplexation, and catalysis of the surface-bound enzyme/NAD + complex. The analysis reveals a concentrating effect resulting in a very high local concentration of enzyme and cofactor on the particle surface, in which the enzyme is saturated by surface-bound NAD, facilitating a rate enhancement of enzyme/NAD + complexation and catalysis. This resulted in high enzyme efficiency within the tethered NAD + system compared to that of the free enzyme/NAD + system, which increases with decreasing enzyme concentration. The role of enzyme adsorption onto solid substrates with a tethered catalyst (such as NAD + ) has potential for creating highly efficient flow biocatalytic systems.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Enzyme Catalysis and Immobilization · Surface Chemistry and Catalysis · Innovative Microfluidic and Catalytic Techniques Innovation

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Institute for Nanoscale Science and Technology, School of Chemical and Physical Sciences, Flinders University, Bedford Park, SA 5042, Australia

CSIRO Manufacturing, Clayton, Melbourne, VIC 3168, Australia

CSIRO Environment, Black Mountain, ACT 2601, Australia

Funding

Australian Government

References (43)

Show source-provided references
1. 10.3390/catal1211145410.3390/catal12111454 ↗
2. 10.1016/j.cej.2022.13540010.1016/j.cej.2022.135400 ↗
3. 10.1039/D2GC02767D10.1039/D2GC02767D ↗
4. 10.1042/bio_2022_10910.1042/bio_2022_109 ↗
5. 10.1038/s41557-022-00931-210.1038/s41557-022-00931-2 ↗
6. 10.1038/s41929-019-0353-010.1038/s41929-019-0353-0 ↗
7. 10.1002/bit.2158410.1002/bit.21584 ↗
8. 10.1016/j.jbiotec.2011.03.00210.1016/j.jbiotec.2011.03.002 ↗
9. 10.1021/acsnano.5b0127810.1021/acsnano.5b01278 ↗
10. 10.1016/j.biortech.2010.09.06910.1016/j.biortech.2010.09.069 ↗
11. 10.1016/j.jbiotec.2008.09.01510.1016/j.jbiotec.2008.09.015 ↗
12. 10.1016/j.jbiotec.2015.01.01610.1016/j.jbiotec.2015.01.016 ↗
13. 10.1038/nnano.2014.10010.1038/nnano.2014.100 ↗
14. 10.1016/j.jbiotec.2013.05.01610.1016/j.jbiotec.2013.05.016 ↗
15. 10.1038/ncomms312710.1038/ncomms3127 ↗
16. 10.1007/s10529-013-1156-z10.1007/s10529-013-1156-z ↗
17. 10.1016/j.bbapap.2012.03.01010.1016/j.bbapap.2012.03.010 ↗
18. 10.1016/0141-0229(86)90041-410.1016/0141-0229(86)90041-4 ↗
19. 10.1016/j.ab.2004.11.01610.1016/j.ab.2004.11.016 ↗
20. Scott, C.; Hartley, C.; Williams, C.; Churches, Q.; Scoble, J.; Turner, N.; French, N. Molecular Machines, WO2017011870A1. 2018.
21. 10.1021/am507466b10.1021/am507466b ↗
22. 10.1021/nl301727k10.1021/nl301727k ↗
23. 10.1021/ja110833r10.1021/ja110833r ↗
24. 10.1021/acs.langmuir.7b0258810.1021/acs.langmuir.7b02588 ↗
25. 10.1021/acsnano.7b0162410.1021/acsnano.7b01624 ↗
26. 10.1021/ie300853810.1021/ie3008538 ↗
27. 10.1021/ac051283m10.1021/ac051283m ↗
28. 10.1021/la046822h10.1021/la046822h ↗
29. 10.1071/CH1531010.1071/CH15310 ↗
30. 10.1088/1468-6996/15/1/01500210.1088/1468-6996/15/1/015002 ↗
31. 10.1016/j.colsurfa.2013.01.02410.1016/j.colsurfa.2013.01.024 ↗
32. 10.1021/la703395w10.1021/la703395w ↗
33. 10.1021/jp075798o10.1021/jp075798o ↗
34. 10.1071/CH2312810.1071/CH23128 ↗
35. 10.1021/acscatal.7b0083810.1021/acscatal.7b00838 ↗
36. 10.1021/la800701410.1021/la8007014 ↗
37. 10.1002/bit.2627710.1002/bit.26277 ↗
38. 10.1016/j.biotechadv.2009.06.00510.1016/j.biotechadv.2009.06.005 ↗
39. 10.1016/0021-9797(68)90272-510.1016/0021-9797(68)90272-5 ↗
40. 10.1039/a806431h10.1039/a806431h ↗
41. 10.1016/S0969-2126(00)00135-010.1016/S0969-2126(00)00135-0 ↗
42. 10.1021/bi500644210.1021/bi5006442 ↗
43. 10.1016/S0092-8240(03)00059-410.1016/S0092-8240(03)00059-4 ↗