journal article·2016-07

A Useful Methodology for Determining the Compaction Degree of Single‐Chain Nanoparticles by Conventional SEC

Alejandro Latorre‐Sánchez, Angel Alegría, Federica Lo Verso, Angel J. Moreno, Arantxa Arbe, Juan Colmenero, José A. Pomposo

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Abstract

The folding/collapse of linear single chains to single‐chain nanoparticles (SCNPs) is a field of intense activity. Current synthetic methods allow obtaining from sparse SCNP morphologies in solution – resembling those observed in intrinsically disordered proteins – to compact SCNP conformations, more akin to those displayed by globular enzymes. A useful characterization technique in the field of SCNPs is “conventional” size‐exclusion chromatography (SEC) with differential refractive index (DRI) detection, providing rapid and convincing evidence of SCNP formation through comparison of the SEC traces of the precursor and the SCNPs. Upon SCNP formation, a noticeable shift of the SEC curve toward longer retention times (i.e., lower hydrodynamic sizes) is observed. However, quantitative information embedded in the SEC curve about the actual “compaction degree” of the SCNPs has not yet been extracted to distinguish between sparse and globular SCNPs. Here, a useful methodology for quantifying the compaction degree of SCNPs by SEC with conventional DRI detector is introduced allowing: i) construction of theoretical SEC curves corresponding to the collapse of a linear precursor having a log‐normal molecular weight distribution to either sparse or globular SCNPs and ii) analysis of experimental SEC curves to estimate the actual morphology of synthetic SCNPs in solution.
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Research context

OpenAlex topics: Protein purification and stability · Protein Interaction Studies and Fluorescence Analysis · Analytical Chemistry and Chromatography

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

Centro de Física de Materiales (CSIC, UPV/EHU) – Materials Physics Center Paseo Manuel de Lardizabal 5 E‐20018 San Sebastián Spain

Departamento de Física de Materiales Universidad del País Vasco (UPV/EHU) Paseo Manuel de Lardizabal 3 E‐20018 San Sebastián Spain

Donostia International Physics Center (DIPC) Paseo Manuel de Lardizabal 4 E‐20018 San Sebastián Spain

IKERBASQUE – Basque Foundation for Science María Díaz de Haro 3 E‐48013 Bilbao Spain

Funding

Ministerio de Economía y Competitividad

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