journal article·2025-02

Assessing complex protein-solvent interactions using environment-controlled crack-growth experiments

Tristan Baumberger, Olivier Ronsin

International Journal of Fracture· Volume 249· Issue 1
Publisher page

Abstract

Abstract The modulation of protein functionality, i.e. their ability to fold/unfold, by adding low molecular weight substances to the “natural” solvent water is an important issue in biochemistry. Taking advantage of the unique ability of gelatin to self assemble into elastic networks via partial renaturation of the native collagen protein, we propose to recast the issue into a fracture mechanics one. We describe a method to decipher the effect of alcohols as cosolvents on gelatin networks from the shift of fracture energy in response to an environmental shock. After suitable subtraction of the viscous dissipation we are able characterize the solvent/network interaction by the relative shift of the free energy characteristic of the crosslinked→dismanteled transition of the network associated to its fracture. Using two alcohols, methanol and glycerol, we show that our method is able to accounts for their known contrasting effects on proteins. We briefly discuss the nature of the energy of interaction. In addition we unveil an open issue regarding the origin and consequence of the poroelastic solvent flow associated to crack propagation in hydrogels.
Source: openaire · Quality: candidate unverified · Source record ↗

Research context

OpenAlex topics: Hydrogels: synthesis, properties, applications · Collagen: Extraction and Characterization · 3D Printing in Biomedical Research

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

References (42)

Show source-provided references
1. Baumberger T, Ronsin O (2010) A convective instability mechanism for quasistatic crack branching in a hydrogel. Eur Phys J E 31:5110.1140/epje/i2010-10546-x ↗
2. Baumberger T, Ronsin O (2010) Cooperative effect of stress and ion displacement on the dynamics of cross-link unzipping and rupture of alginate gels. Biomacromol 11(6):157110.1021/bm1002015 ↗
3. Baumberger T, Ronsin O (2020) Environmental control of crack propagation in polymer hydrogels. Mech Soft Mater 2(1):1410.1007/s42558-020-00027-2 ↗
4. Baumberger T, Caroli C, Ronsin O (2003) Self-healing slip pulses and the friction of gelatin gels. Eur Phys J E 11(1):8510.1140/epje/i2003-10009-7 ↗
5. Baumberger T, Caroli C, Martina D (2006) Fracture of a biopolymer gel as a viscoplastic disentanglement process. Eur Phys J E 21:8110.1140/epje/i2006-10048-6 ↗
6. Baumberger T, Caroli C, Martina D (2006) Solvent control of crack dynamics in a reversible hydrogel. Nat Mater 5(7):55210.1038/nmat1666 ↗
7. Biot MA (1941) General theory of three-dimensional consolidation. J Appl Phys 12(2):15510.1063/1.1712886 ↗
8. Bouklas N, Huang R (2012) Swelling kinetics of polymer gels: comparison of linear and nonlinear theories. Soft Matter 8(31):819410.1039/c2sm25467k ↗
9. Chen S, Ravi-Chandar K (2023) Rate-dependent fracture behavior of gelatin-based hydrogels. Int J Fract 243(2):18510.1007/s10704-023-00738-3 ↗
10. Chen S, Huang R, Ravi-Chandar K (2020) Linear and nonlinear poroelastic analysis of swelling and drying behavior of gelatin-based hydrogels. Int J Solids Struct 195:4310.1016/j.ijsolstr.2020.03.017 ↗
11. Ciccotti M (2009) Stress-corrosion mechanisms in silicate glasses. J Phys D Appl Phys 42(21):21400610.1088/0022-3727/42/21/214006 ↗
12. Creton C (2017) 50th anniversary perspective: networks and gels: noft but dynamic and tough. Macromolecules 50(21):829710.1021/acs.macromol.7b01698 ↗
13. Djabourov M, Leblond J, Papon P (1988) Gelation of aqueous gelatin solutions I. Structural investigation. J Phys 49(2):31910.1051/jphys:01988004902031900 ↗
14. Djabourov M, Nishinari K, Ross-Murphy SB (2013) Physical gels from biological and synthetic polymers. Cambridge University Press, Cambridge10.1017/CBO9781139024136 ↗
15. Doi M (2009) Gel dynamics. J Phys Soc Jpn 78(5):05200110.1143/JPSJ.78.052001 ↗
16. Forte A, D’amico F, Charalambides M, Dini D, Williams J (2015) Modelling and experimental characterisation of the rate dependent fracture properties of gelatine gels. Food Hydrocolloids 46:18010.1016/j.foodhyd.2014.12.028 ↗
17. Haque MA, Kurokawa T, Gong JP (2012) Super tough double network hydrogels and their application as biomaterials. Polymer 53(9):180510.1016/j.polymer.2012.03.013 ↗
18. Hong W, Zhao X, Zhou J, Suo Z (2008) A theory of coupled diffusion and large deformation in polymeric gels. J Mech Phys Solids 56(5):177910.1016/j.jmps.2007.11.010 ↗
19. Hui C, Ruina A, Creton C, Kramer E (1992) Micromechanics of crack growth into a craze in a polymer glass. Macromolecules 25(15):394810.1021/ma00041a018 ↗
20. Hui CY, Jagota A, Bennison S, Londono J (2003) Crack blunting and the strength of soft elastic solids. Proc R Soc London A Math Phys Eng Sci 459(2034):148910.1098/rspa.2002.1057 ↗
21. Lee KY, Mooney DJ (2012) Alginate: properties and biomedical applications. Prog Polym Sci 37(1):10610.1016/j.progpolymsci.2011.06.003 ↗
22. Long R, Hui CY (2016) Fracture toughness of hydrogels: measurement and interpretation. Soft Matter 12(39):806910.1039/C6SM01694D ↗
23. Long R, Hui CY, Gong JP, Bouchbinder E (2021) The fracture of highly deformable soft materials: a tale of two length scales. Ann Rev Condens Matter Phys 12(1):7110.1146/annurev-conmatphys-042020-023937 ↗
24. McEvoy H, Ross-Murphy S, Clark A (1985) Large deformation and ultimate properties of biopolymer gels: 1. Single biopolymer component systems. Polymer 26(10):148310.1016/0032-3861(85)90081-3 ↗
25. Moosavian H, Tang T (2023) Statistical mechanics of coil-rod structure in biopolymer gels. J Mech Phys Solids 175:10527210.1016/j.jmps.2023.105272 ↗
26. Naassaoui I, Ronsin O, Baumberger T (2018) A poroelastic signature of the dry/wet state of a crack tip propagating steadily in a physical hydrogel. Extreme Mech Lett 22:810.1016/j.eml.2018.04.004 ↗
27. Naficy S, Brown HR, Razal JM, Spinks GM, Whitten PG (2011) Progress toward robust polymer hydrogels. Aust J Chem 64(8):100710.1071/CH11156 ↗
28. Noselli G, Lucantonio A, McMeeking RM, DeSimone A (2016) Poroelastic toughening in polymer gels: a theoretical and numerical study. J Mech Phys Solids 94:3310.1016/j.jmps.2016.04.017 ↗
29. Pinto BDS, Ronsin O, Baumberger T (2023) Syneresis of self-crowded calcium-alginate hydrogels as a self-driven athermal aging process. Soft Matter 19(9):172010.1039/D2SM01496C ↗
30. Ronsin O, Caroli C, Baumberger T (2009) Interplay between shear loading and structural aging in a physical gelatin gel. Phys Rev Lett 103(13):13830210.1103/PhysRevLett.103.138302 ↗
31. Ronsin O, Caroli C, Baumberger T (2016) Glass-like dynamics of the strain-induced coil/helix transition on a permanent polymer network. J Chem Phys 144(6):110.1063/1.4941456 ↗
32. Ronsin O, Caroli C, Baumberger T (2017) Preferential hydration fully controls the renaturation dynamics of collagen in water-glycerol solvents. Eur Phys J E 40:110.1140/epje/i2017-11545-1 ↗
33. Ronsin O, Naassaoui I, Marcellan A, Baumberger T (2019) Environmental nanoparticle-induced toughening and pinning of a growing crack in a biopolymer hydrogel. Phys Rev Lett 123(15):15800210.1103/PhysRevLett.123.158002 ↗
34. Schilcher G, Schlagenhauf A, Schneditz D, Scharnagl H, Ribitsch W, Krause R, Rosenkranz AR, Stojakovic T, Horina JH (2013) Ethanol causes protein precipitation—new safety issues for catheter locking techniques. PLoS ONE 8(12):e8486910.1371/journal.pone.0084869 ↗
35. Shao Q, Fan Y, Yang L, Qin Gao Y (2012) From protein denaturant to protectant: comparative molecular dynamics study of alcohol/protein interactions. J Chem Phys 136(11):1010.1063/1.3692801 ↗
36. Shi M, Jiao Q, Yin T, Vlassak JJ, Suo Z (2023) Hydrolysis embrittles poly (lactic acid). MRS Bull 48(1):4510.1557/s43577-022-00368-5 ↗
37. Sun JY, Zhao X, Illeperuma WR, Chaudhuri O, Oh KH, Mooney DJ, Vlassak JJ, Suo Z (2012) Highly stretchable and tough hydrogels. Nature 489(7414):13310.1038/nature11409 ↗
38. Tanaka T, Swislow G, Ohmine I (1979) Phase separation and gelation in gelatin gels. Phys Rev Lett 42(23):155610.1103/PhysRevLett.42.1556 ↗
39. Timasheff SN (1993) The control of protein stability and association by weak interactions with water: how do solvents affect these processes? Annu Rev Biophys Biomol Struct 22(1):6710.1146/annurev.bb.22.060193.000435 ↗
40. Yu Y, Landis CM, Huang R (2018) Steady-state crack growth in polymer gels: a linear poroelastic analysis. J Mech Phys Solids 118:1510.1016/j.jmps.2018.05.008 ↗
41. Yu Y, Bouklas N, Landis CM, Huang R (2020) Poroelastic effects on the time-and rate-dependent fracture of polymer gels. J Appl Mech 87(3):110.1115/1.4045004 ↗
42. Zhao X (2014) Multi-scale multi-mechanism design of tough hydrogels: building dissipation into stretchy networks. Soft Matter 10(5):67210.1039/C3SM52272E ↗