journal article·2026-04-01

Evaluation of the applicability of viable quantitative real time-PCR (v-qPCR) to expedite viral penetration resistance assessment of personal protective equipment

Michelangelo Di Giuseppe, Brooke Vollmer, Nora Y. Payne

Publisher page

Abstract

Purpose In the USA, personal protective equipment (PPE) that claims to resist viral penetration, must pass the American Society for Testing and Materials (ASTM) F1671 test method which uses a standard plaque assay (SPA) to quantify Phi-X174 virus. SPA is labor-intensive, time-consuming, limiting its practicality for rapid screening. This study evaluates whether a viable quantitative Real-time Poly-merase Chain Reaction (v-qPCR), targeting two amplicon size (332bp, and 1644bp) can serve as a rapid screening tool for PPE during shortages. Design/methodology/approach Phi-X174 was subjected to heat and UVC treatments known to damage viral capsids and/or genomes. Samples were treated with propidium monoazide (PMA), and viral quantities were assessed using v-qPCR and SPA. Quantification outcomes from v-qPCR were compared against SPA titers. Findings v-qPCR targeting the 332 bp fragment produced quantification results consistent with SPA, with the greatest difference being about one order of magnitude (3.99×10ˆ10± 4.09×10ˆ9 Particle-Forming Unit/ml (PFU/ml) vs. 2.98×10ˆ9 ± 1.80×10ˆ9 PFU/mL). The v-qPCR method demonstrated a limit of detection of 500 viral copies for the 332 bp target. The 1644 bp amplicon showed higher variability and lower sensitivity. Originality/value This study is the first to assess v-qPCR's potential for PPE testing by evaluating amplicon size effects and comparing quantification to SPA under standardized damaging conditions. The results suggest that v-qPCR offers a practical screening alternative to support rapid PPE evaluation.
Source: crossref · Quality: baseline

Research context

OpenAlex topics: Molecular Biology Techniques and Applications · SARS-CoV-2 detection and testing · Viral gastroenteritis research and epidemiology

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

National Personal Protective Technology Laboratory, NIOSH , , ,

References (35)

Show source-provided references
1. A review of modern methods for the detection of foodborne pathogens10.3390/microorganisms11051111 ↗
2. Standard test method for resistance of materials used in protective clothing to penetration by blood-borne pathogens using Phi-X174 bacteriophage penetration as a test system
3. Detection of yellow fever virus: a comparison of quantitative real-time PCR and plaque assay10.1016/s0166-0934(03)00129-0 ↗
4. Viral concentration determination through plaque assays: using traditional and novel overlay systems10.3791/52065 ↗
5. Biotium (2025), “PMA real-time PCR bacterial viability kit – Salmonella enterica (invA)”, 03/10/2025], available at: https://biotium.com/product/pma-real-time-pcr-bacterial-viability-kit-salmonella-enterica-inva/
6. Biotium PMAxx™ dye (2023), “Standard viability PCR protocol”, 9/19/2023, available at: https://biotium.com/wp-content/uploads/2015/05/PI-40069.pdf
7. Biotrend (n.d.), “Viability PCR starter kit with PMA”, available at: https://www.biotrend.com/-186/viability-pcr-starter-kit-with-514058648.html
8. Application of quantitative PCR for the detection of microorganisms in water10.1007/s00216-012-6399-3 ↗
9. The plaque assay of animal viruses10.1016/s0065-3527(08)60689-2 ↗
10. Can qPCR replace the standard plaque assay in the ASTM F1671 to assess personal protective equipment barrier performance?10.1108/ijcst-06-2024-208 ↗
11. Viability dyes quantitative PCR (vPCR) assays targeting foodborne pathogens – scientific prospecting (2010-2022)10.1016/j.microc.2023.109769 ↗
12. Real-time PCR provides improved detection and titer determination of bacteriophage10.2144/03352rr02 ↗
13. Filion · 2012 · 242
14. Propidium monoazide coupled with PCR predicts infectivity of enteric viruses in swine manure and biofertilized soil10.1007/s12560-015-9225-1 ↗
15. EPA method 1615. Measurement of enterovirus and norovirus occurrence in water by culture and RT-qPCR. I. Collection of virus samples10.3791/52067 ↗
16. Developing a methodology to collect empirical data that informs policy and practices for stockpiling personal protective equipment10.1016/j.ajic.2020.07.010 ↗
17. Long amplicon (LA)-qPCR for the discrimination of infectious and noninfectious phix174 bacteriophages after UV inactivation10.1016/j.watres.2016.07.032 ↗
18. Evaluating a one-bath process for imparting antimicrobial activity and repellency to nonwoven surgical gown fabrics10.1177/004051750007000905 ↗
19. A rigorous assessment and comparison of enumeration methods for environmental viruses10.1038/s41598-020-75490-y ↗
20. Real-time qPCR as a method for detection of antibody-neutralized phage particles10.3389/fmicb.2017.02170 ↗
21. A basic guide to real time PCR in microbial diagnostics: definitions, parameters, and everything10.3389/fmicb.2017.00108 ↗
22. Use of ethidium monoazide and propidium monoazide to determine viral infectivity upon inactivation by heat, UV- exposure and chlorine10.1016/j.ijheh.2015.02.003 ↗
23. Louten · 2016 · 326
24. Nolan · 2013
25. PMA Real (2025), “PMA real-time PCR bacterial viability kit – Staphylococcus aureus (nuc) – 200 assays”, 03/10/2025, available at: https://biotium.com/product/pma-real-time-pcr-bacterial-viability-kit-staphylococcus-aureus-nuc/
26. Premarket notification requirements concerning gowns intended for use in health care settings
27. Public Health Preparedness · 2024
28. Propidium monoazide integrated with qPCR enables the detection and enumeration of infectious enteric RNA and DNA viruses in clam and fermented sausages10.3389/fmicb.2016.02008 ↗
29. Report to congressional commetees-COVID-19 continued attention needed to enhance federal preparedness, response, service delivery, and program integrity
30. Rodríguez-Lázaro · 2013
31. Challenging the ‘gold standard’ of colony-forming units – validation of a multiplex real-time PCR for quantification of viable Campylobacter spp. in meat rinses10.1016/j.ijfoodmicro.2021.109417 ↗
32. Use of antiviral nanocoating in personal protective wear10.4103/ijhas.ijhas_80_20 ↗
33. A viability quantitative PCR dilemma: are longer amplicons better?10.1128/aem.02653-20 ↗
34. Plasma and antimicrobial treatment of nonwoven fabrics for surgical gowns10.1177/004051750407401208 ↗
35. Advances and challenges in viability detection of foodborne pathogens10.3389/fmicb.2016.01833 ↗