journal article·2006-01-01

Amide-to-Amide Hydrogen Bonds in the Presence of a Pyridine Functionality: Crystal Structures of Bis(pyridinecarboxamido)alkanes

Madhushree Sarkar, Kumar Biradha

Crystal Growth & Design· Volume 6· Issue 1
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Abstract

Crystal structures of bis(4-pyridinecarboxamido)alkane and bis(3-pyridinecarboxamido)alkane derivatives were determined and analyzed in terms of hydrogen bond networks. Seven crystal structures out of the eight structures studied exhibited amide-to-amide hydrogen bonds. Out of these seven, five form the anticipated β -sheet network whereas two structures form a doubly interpenetrated (4,4)-network. In only one structure does the pyridyl group interfere in the amide-to-amide hydrogen bond, leading to the formation of an N−H···N hydrogen bond network. The analyses and rationalization of these structures and also related derivatives in the Cambridge Structural Database suggested that amide-to-amide hydrogen bond formation depends on the interplanar angle between amide and pyridine groups.
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Research context

OpenAlex topics: Crystallography and molecular interactions · Crystal structures of chemical compounds · Molecular spectroscopy and chirality

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Affiliations

Department of Chemistry, Indian Institute of Technology, Kharagpur-721302, India

References (38)

Show source-provided references
1. Desiraju G. R. · 1989
2. Zaworotko M. · J. Chem. Commun. · 2001 · 110.1039/b007127g ↗
3. Holman K. T. · Acc. Chem. Res. · 2001 · 34 · 10710.1021/ar970272f ↗
4. Aakeröy C. B. · Angew. Chem., Int. Ed. · 2001 · 40 · 324010.1002/1521-3773(20010903)40:17<3240::AID-ANIE3240>3.0.CO;2-X ↗
5. Aakeröy C. B. · Acta Crystallogr. · 1997 · 53 · 56910.1107/S0108768197008446 ↗
6. Desiraju G. R. · Acc. Chem. Res. · 2002 · 35 · 56510.1021/ar010054t ↗
7. Biradha K. · CrystEngComm · 2003 · 5 · 27410.1039/b309903b ↗
8. Aoyama Y. · Top. Curr. Chem. · 1998 · 198 · 13110.1007/3-540-69178-2_4 ↗
9. Desiraju G. R. · Angew. Chem., Int. Ed. Engl. · 1995 · 34 · 231110.1002/anie.199523111 ↗
10. Vangala V. R. · Cryst. Growth Des. · 2005 · 5 · 9910.1021/cg049967v ↗
11. Vangala V. R. · J. Am. Chem. Soc. · 2003 · 125 · 1449510.1021/ja037227p ↗
12. Herbstein, F. H.Comprehensive Supramolecular Chemistry; MacNicol, D. D., Toda, F., Bishop, R., Eds.; Pergamon: Oxford, U.K., 1996; Vol. 6, pp 61−83.
13. Sharma C. V. K. · J. Chem. Commun. · 1996 · 265510.1039/CC9960002655 ↗
14. Bhogala B. R. · Cryst. Growth Des. · 2002 · 2 · 32510.1021/cg025537y ↗
15. Bhogala B. R. · Cryst. Growth Des. · 2003 · 3 · 54710.1021/cg034047i ↗
16. Walsh R. D. B. · J. Chem. Commun. · 2003 · 18610.1039/b208574g ↗
17. Nguyen T. L. · J. Am. Chem. Soc. · 2001 · 123 · 1105710.1021/ja016635v ↗
18. Palmer P. A. · Acta Crystallogr. · 1980 · 36 · 144710.1107/S0567740880006255 ↗
19. Harkema S. · J. Acta Crystallogr. · 1980 · 36 · 318210.1107/S0567740880011235 ↗
20. Pineault C. · Acta Crystallogr. · 1983 · 39 · 1434
21. Pineault C. · Acta Crystallogr. · 1983 · 39 · 1437
22. Harkema S. · J. Acta Crystallogr. · 1977 · 33 · 360910.1107/S0567740877011662 ↗
23. Adams W. W. · Acta Crystallogr. · 1978 · 34 · 95410.1107/S0567740878004483 ↗
24. Sarkar M. · Chem. Commun. · 2005 · 222910.1039/b500666j ↗
25. Muthu S. · J. Dalton Trans. · 2001 · 357710.1039/b105696b ↗
26. Muthu S. · J. Dalton Trans. · 2002 · 456110.1039/B206680G ↗
27. Ge C.-H. · Polyhedron · 2003 · 22 · 349310.1016/j.poly.2003.09.003 ↗
28. Lauher J. W. · Mol. Cryst. Liq. Cryst. · 1992 · 211 · 9910.1080/10587259208025809 ↗
29. Zhao Y.-L. · J. Am. Chem. Soc. · 2002 · 124 · 2002
30. Batten S. R. · Angew. Chem., Int. Ed. · 1998 · 37 · 146010.1002/(SICI)1521-3773(19980619)37:11<1460::AID-ANIE1460>3.0.CO;2-Z ↗
31. Dong Y.-B. · Chem. Mater. · 1999 · 11 · 141310.1021/cm990082u ↗
32. Withersby M. A. · New J. Chem. · 1999 · 23 · 57310.1039/a900947g ↗
33. Kondo M. · Chem. Mater. · 2000 · 12 · 128810.1021/cm990612m ↗
34. Ge C.-H. · Chin. J. Chem. · 2003 · 21 · 58110.1002/cjoc.20030210521 ↗
35. Sarkar M. · CrystEngComm · 2004 · 6 · 31010.1039/b412903b ↗
36. Allen F. H. · Chem. Des. Automation News · 1993 · 8 · 31
37. Sheldrick G. M. · 1997
38. Spek A. L. · 2002