journal article·2011-12-07

Cucurbit[n]urils (n= 5–8): A Comprehensive Solid State Study

David Bardelang, Konstantin A. Udachin, Donald M. Leek, James C. Margeson, Gordon Chan, Christopher I. Ratcliffe, John A. Ripmeester

Crystal Growth & Design· Volume 11· Issue 12
Publisher page

Abstract

Cucurbit[ n ]urils (CB[ n ], n = 5–8) have been prepared, separated, and purified, and the structure of their solid state assemblies has been addressed. A number of general features were identified which are of interest to understand some peculiar properties of cucurbiturils (solubility, aggregation, assembly, transformation to porous crystals, influence of air humidity). CB[5], CB[6], and CB[8] were isolated as hydrate crystals whose structures were found to show a strong tendency of the macrocycles to interpenetrate. A self-closing effect was rationalized in terms of multiple weak CH···O interactions between the macrocycles, the degree of which is discussed in detail. Solid state cross polarization magic angle spinning (CP-MAS) 13 C NMR spectra obtained at 900 MHz were correlated with the crystal structures. An odd–even effect in the crystallinity of thermally treated CB samples (CB[5] and CB[7] amorphous, CB[6] and CB[8] crystalline) was observed, which is reflected in differences in water solubility (CB[5] and CB[7] are water-soluble, whereas CB[6] and CB[8] are only very scarcely so). This may be explained by a less efficient self-association for CB[5] and CB[7] as compared with CB[6] and CB[8], which is reflected in the number of inter-cucurbituril CH···O interactions per cucurbituril. This leads to a more favorable solvation for the CBs having an odd symmetry, whereas those with even symmetry prefer to self-associate in a manner ultimately leading to crystallization. We also propose an explanation for the presence of anions (Cl – ) inside some cucurbituril materials, whose cavity is often considered hydrophobic. Furthermore, it is demonstrated that large quantities of the very stable microporous CB[6] crystals (which have the R 3̅ channel structure) can be obtained very easily by a simple thermal treatment of the hexagonal crystals of CB[6] ( P 6/ mmm structure) obtained directly from the initial reaction used to synthesize the various CB[ n ]. The micromorphology of the CB[ n ] powders was established using scanning electron microscopy (SEM), and the tendency of each material to absorb water from the atmosphere was demonstrated by thermogravimetric analyses (TGA).
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Supramolecular Chemistry and Complexes · Supramolecular Self-Assembly in Materials · Crystallography and molecular interactions

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

NRC Steacie Institute for Molecular Sciences, 100 Sussex Drive, Ottawa, Ontario, K1A0R6, Canada

NRC Institute for Research in Construction, 1200 Montreal Road, Ottawa, Ontario K1A0R6, Canada

References (100+)

Show source-provided references
1. Gerasko O. A. · Russ. Chem. Rev. · 2002 · 71 · 74110.1070/RC2002v071n09ABEH000748 ↗
2. Lee J. W. · Acc. Chem. Res. · 2003 · 36 · 62110.1021/ar020254k ↗
3. Lagona J. · Angew. Chem., Int. Ed. · 2005 · 44 · 484410.1002/anie.200460675 ↗
4. Isaacs L. · Chem. Commun. · 2009 · 61910.1039/B814897J ↗
5. Freeman W. A. · J. Am. Chem. Soc. · 1981 · 103 · 736710.1021/ja00414a070 ↗
6. Flinn A. · Angew. Chem., Int. Ed. Engl. · 1992 · 31 · 147510.1002/anie.199214751 ↗
7. Kim J. · J. Am. Chem. Soc. · 2000 · 122 · 54010.1021/ja993376p ↗
8. Day A. · J. Org. Chem. · 2001 · 66 · 809410.1021/jo015897c ↗
9. Zhao J. · Angew. Chem., Int. Ed. · 2001 · 40 · 423310.1002/1521-3773(20011119)40:22<4233::AID-ANIE4233>3.0.CO;2-D ↗
10. Isobe H. · Org. Lett. · 2002 · 4 · 128710.1021/ol025749o ↗
11. Jon S. Y. · J. Am. Chem. Soc. · 2003 · 125 · 1018610.1021/ja036536c ↗
12. Day A. I. · Molecules · 2003 · 8 · 7410.3390/80100074 ↗
13. Miyahara Y. · Angew. Chem., Int. Ed. · 2004 · 43 · 501910.1002/anie.200460764 ↗
14. Liu S. · J. Am. Chem. Soc. · 2005 · 127 · 1679810.1021/ja056287n ↗
15. Isaacs L. · J. Am. Chem. Soc. · 2005 · 127 · 1800010.1021/ja056988k ↗
16. Huang W.-H. · J. Am. Chem. Soc. · 2006 · 128 · 1474410.1021/ja064776x ↗
17. Huang W.-H. · Angew. Chem., Int. Ed. · 2007 · 46 · 742510.1002/anie.200702189 ↗
18. Kim J. · Angew. Chem., Int. Ed. · 2007 · 46 · 739310.1002/anie.200702540 ↗
19. Kim K. · Chem. Soc. Rev. · 2007 · 36 · 26710.1039/B603088M ↗
20. Ni X.-L. · Cryst. Growth Des. · 2008 · 8 · 344610.1021/cg800451z ↗
21. Tian Z.-C. · J. Mol. Struct. · 2008 · 888 · 4810.1016/j.molstruc.2007.11.029 ↗
22. Yu D.-H. · J. Mol. Struct. · 2008 · 891 · 24710.1016/j.molstruc.2008.03.045 ↗
23. Zheng L.-M. · Molecules · 2008 · 13 · 281410.3390/molecules13112814 ↗
24. Huang W.-H. · Org. Lett. · 2008 · 10 · 257710.1021/ol800893n ↗
25. Zhou F.-G. · J. Mol. Struct. · 2009 · 927 · 1410.1016/j.molstruc.2009.01.051 ↗
26. Chen Z.-H. · J. Mol. Struct. · 2009 · 930 · 14010.1016/j.molstruc.2009.05.005 ↗
27. Zhang Y.-Q. · J. Mol. Struct. · 2009 · 929 · 16710.1016/j.molstruc.2009.04.022 ↗
28. Wu L.-H. · J. Mol. Struct. · 2009 · 920 · 18310.1016/j.molstruc.2008.10.057 ↗
29. Rekharsky M. V. · Proc. Natl. Acad. Sci. U. S. A. · 2007 · 104 · 2073710.1073/pnas.0706407105 ↗
30. Hwang I. · J. Am. Chem. Soc. · 2007 · 129 · 417010.1021/ja071130b ↗
31. Moghaddam S. · J. Am. Chem. Soc. · 2009 · 131 · 401210.1021/ja808175m ↗
32. Kim K. · Chem. Soc. Rev. · 2002 · 31 · 9610.1039/a900939f ↗
33. Park K.-M. · J. Am. Chem. Soc. · 2002 · 124 · 214010.1021/ja011654q ↗
34. Park K.-M. · Supramol. Chem. · 2002 · 14 · 15310.1080/10610270290026059 ↗
35. Ko Y. H. · J. Am. Chem. Soc. · 2004 · 126 · 193210.1021/ja031567t ↗
36. Kim S.-Y. · Chem. Asian J. · 2007 · 2 · 74710.1002/asia.200700043 ↗
37. Ke C.-F. · Chem. Commun. · 2007 · 3374
38. Rauwald U. · Angew. Chem., Int. Ed. · 2008 · 47 · 395010.1002/anie.200705591 ↗
39. Tuncel D. · Chem.—Eur. J. · 2008 · 14 · 411010.1002/chem.200702003 ↗
40. Ko Y. H. · Angew. Chem., Int. Ed. · 2008 · 47 · 410610.1002/anie.200800581 ↗
41. Wang W. · Adv. Polym. Sci. · 2009 · 222 · 205
42. Nally R. · Tetrahedron · 2009 · 65 · 724910.1016/j.tet.2009.02.055 ↗
43. Jayaraj N. · Langmuir · 2009 · 25 · 1382010.1021/la9020806 ↗
44. Mileo E. · Chem . Eur. J. · 2009 · 15 · 785910.1002/chem.200802647 ↗
45. Lee J. W. · Chem. Commun. · 2001 · 104210.1039/b103380h ↗
46. Day A. I. · Angew. Chem., Int. Ed. · 2002 · 41 · 27510.1002/1521-3773(20020118)41:2<275::AID-ANIE275>3.0.CO;2-M ↗
47. Blanch R. J. · Nano Lett. · 2002 · 2 · 14710.1021/nl015655s ↗
48. Jeon W. S. · Angew. Chem., Int. Ed. · 2003 · 42 · 409710.1002/anie.200351925 ↗
49. Jeon W. S. · Angew. Chem., Int. Ed. · 2005 · 44 · 8710.1002/anie.200461806 ↗
50. Ko Y. H. · Chem. Commun. · 2007 · 130510.1039/B615103E ↗
51. Sindelar V. · Adv. Funct. Mater. · 2007 · 17 · 69410.1002/adfm.200600969 ↗
52. Tuncel D. · Chem. Commun. · 2007 · 136910.1039/B616764K ↗
53. Angelos S. · Angew. Chem., Int. Ed. · 2008 · 47 · 222210.1002/anie.200705211 ↗
54. Ben Shir I. · J. Org. Chem. · 2008 · 73 · 877210.1021/jo801350b ↗
55. Khashab N. M. · Eur. J. Org. Chem. · 2009 · 11 · 166910.1002/ejoc.200801300 ↗
56. Hwang I. · Chem. Commun. · 2009 · 41610.1039/B818889K ↗
57. Angelos S. · J. Am. Chem. Soc. · 2009 · 131 · 1134410.1021/ja9042752 ↗
58. Angelos S. · J. Am. Chem. Soc. · 2009 · 131 · 1291210.1021/ja9010157 ↗
59. Buschmann H.-J. · Thermochim. Acta · 2003 · 399 · 20310.1016/S0040-6031(02)00462-8 ↗
60. Bush M. E. · J. Am. Chem. Soc. · 2005 · 127 · 1451110.1021/ja0548440 ↗
61. Heitmann L. M. · J. Am. Chem. Soc. · 2006 · 128 · 1257410.1021/ja064323s ↗
62. Rekharsky M. V. · J. Am. Chem. Soc. · 2006 · 128 · 1487110.1021/ja063323p ↗
63. Rekharsky M. V. · Chem. Commun. · 2008 · 223610.1039/b719902c ↗
64. Bailey D. M. · Chem.—Eur. J. · 2008 · 14 · 606910.1002/chem.200800463 ↗
65. Zhang H. · J. Phys. Chem. A · 2009 · 113 · 150810.1021/jp808625v ↗
66. Reczek J. J. · J. Am. Chem. Soc. · 2009 · 131 · 240810.1021/ja808936y ↗
67. Wheate N. J. · Chem. Commun. · 2004 · 142410.1039/b404358h ↗
68. Jeon Y. J. · Org. Biomol. Chem. · 2005 · 3 · 212210.1039/b504487a ↗
69. Wheate N. J. · Dalton Trans. · 2006 · 3 · 45110.1039/B513197A ↗
70. Bali M. S. · Dalton Trans. · 2006 · 45 · 533710.1039/B609881A ↗
71. Kemp S. · J. Biol. Inorg. Chem. · 2007 · 12 · 96910.1007/s00775-007-0269-z ↗
72. Wheate N. J. · Dalton Trans. · 2007 · 43 · 505510.1039/b704973k ↗
73. Zhao Y. · Org. Biomol. Chem. · 2008 · 6 · 450910.1039/b813759e ↗
74. Buck D. P. · Dalton Trans. · 2008 · 17 · 232810.1039/b718322d ↗
75. Wang R. · Org. Biomol. Chem. · 2008 · 6 · 195510.1039/b801591k ↗
76. Saleh N. · Angew. Chem., Int. Ed. · 2008 · 47 · 539810.1002/anie.200801054 ↗
77. Dong N. · Supramol. Chem. · 2008 · 20 · 66310.1080/10610270701666018 ↗
78. Wheate N. J. · J. Inorg. Biochem. · 2008 · 102 · 206010.1016/j.jinorgbio.2008.06.005 ↗
79. Wang R. · Org. Biomol. Chem. · 2009 · 7 · 243510.1039/b903057c ↗
80. Zhao Y. · Dalton Trans. · 2009 · 26 · 519010.1039/b905112k ↗
81. Kennedy A. R. · Dalton Trans. · 2009 · 37 · 769510.1039/b907917c ↗
82. Wang R. · Dalton Trans. · 2009 · 18 · 358410.1039/b904028e ↗
83. Montes-Navajas P. · Photochem. Photobiol. Sci. · 2009 · 8 · 174310.1039/b9pp00041k ↗
84. Wyman I. W. · Org. Biomol. Chem. · 2010 · 8 · 24710.1039/B915694A ↗
85. Wyman I. W. · Org. Biomol. Chem. · 2010 · 8 · 25310.1039/B917610A ↗
86. Uzunova V. D. · Org. Biomol. Chem. · 2010 · 8 · 203710.1039/b925555a ↗
87. Huang W.-H. · J. Am. Chem. Soc. · 2008 · 130 · 844610.1021/ja8013693 ↗
88. Freeman W. A. · Acta Crystallogr. Sect. B · 1984 · 40 · 38210.1107/S0108768184002354 ↗
89. Kuz’mina L. G. · New J. Chem. · 2006 · 30 · 45810.1039/b511456j ↗
90. Wheate N. J. · J. Phys. Chem. B · 2008 · 112 · 231110.1021/jp709847p ↗
91. Grant M. P. · J. Chem. Eng. Data · 2009 · 54 · 32310.1021/je800347u ↗
92. Da Silva J. P. · Org. Lett. · 2011 · 13 · 241010.1021/ol200647j ↗
93. Bardelang D. · J. Am. Chem. Soc. · 2009 · 131 · 540210.1021/ja900306m ↗
94. Bardelang D. · CrystEngComm · 2007 · 9 · 97310.1039/b711285h ↗
95. Bardelang D. · Chem. Commun. · 2008 · 492710.1039/b807033d ↗
96. Lim S. · Angew. Chem., Int. Ed. · 2008 · 47 · 335210.1002/anie.200800772 ↗
97. Taylor R. · J. Am. Chem. Soc. · 1982 · 104 · 506310.1021/ja00383a012 ↗
98. Desiraju G. R. · Acc. Chem. Res. · 1991 · 24 · 29010.1021/ar00010a002 ↗
99. Desiraju G. R. · Acc. Chem. Res. · 1996 · 29 · 44110.1021/ar950135n ↗
100. Castellano R. K. · Curr. Org. Chem. · 2004 · 8 · 84510.2174/1385272043370384 ↗