journal article·2019-11-06Open access

Identification Schemes for Metal–Organic Frameworks To Enable Rapid Search and Cheminformatics Analysis

Benjamin J. Bucior, Andrew S. Rosen, Maciej Haranczyk, Zhenpeng Yao, Michael E. Ziebel, Omar K. Farha, Joseph T. Hupp, J. Ilja Siepmann, Alán Aspuru-Guzik, Randall Q. Snurr

Crystal Growth & Design· Volume 19· Issue 11

Abstract

The modular nature of metal–organic frameworks (MOFs) leads to a very large number of possible structures. High-throughput computational screening has led to a rapid increase in property data that has enabled several potential applications for MOFs, including gas storage, separations, catalysis, and other fields. Despite their rich chemistry, MOFs are typically named using an ad hoc approach, which can impede their searchability and the discovery of broad insights. In this article, we develop two systematic MOF identifiers, coined MOFid and MOFkey, and algorithms for deconstructing MOFs into their building blocks and underlying topological network. We review existing cheminformatics formats for small molecules and address the challenges of adapting them to periodic crystal structures. Our algorithms are distributed as open-source software, and we apply them here to extract insights from several MOF databases. Through the process of designing MOFid and MOFkey, we provide a perspective on opportunities for the community to facilitate data reuse, improve searchability, and rapidly apply cheminformatics analyses.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Metal-Organic Frameworks: Synthesis and Applications · Machine Learning in Materials Science · Crystallography and molecular interactions

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

Affiliations

IMDEA Materials Institute, C/Eric Kandel 2, 2890 6 Getafe, Madrid, Spain

Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States

Department of Chemistry, University of California, Berkeley, California 94720, United States

Department of Chemistry and Chemical Theory Center, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States

Department of Chemical Engineering and Materials Science, University of Minnesota, 421 Washington Avenue SE, Minneapolis, Minnesota 55455, United States

Department of Chemistry and Department of Computer Science, University of Toronto, Toronto, Ontario M5S 3H6, Canada

Vector Institute for Artificial Intelligence, Toronto, Ontario M5S 1M1, Canada

Canadian Institute for Advanced Research (CIFAR) Senior Fellow, Toronto, Ontario M5S 1M1, Canada

Funding

U.S. Department of Energy · U.S. Department of Defense · National Science Foundation

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