Molecular Complexes of Homologous Alkanedicarboxylic Acids with Isonicotinamide: X-ray Crystal Structures, Hydrogen Bond Synthons, and Melting Point Alternation
Source abstract
Abstract
Crystallization of α,ω-alkanedicarboxylic acids (HOOC−(CH 2 ) n - 2 −COOH, n = 2−6) with isonicotinamide (IN) is carried out in 1:2 and 1:1 stoichiometry. Five cocrystals of (diacid)·(IN) 2 composition (diacid = oxalic acid, malonic acid, succinic acid, glutaric acid, and adipic acid) are characterized by X-ray diffraction at 153(2) K. Tapes of acid−pyridine O−H···N and amide−amide N−H···O hydrogen bond synthons stabilize these five crystal structures as predicted by the hierarchic model: the best donor (COOH) and best acceptor group (pyridine N) hydrogen bond as acid−pyridine and the second best donor−acceptor group (CONH 2 ) aggregates as an amide dimer. Glutaric acid and adipic acid cocrystallize in 1:1 stoichiometry also, (diacid)·(IN), with acid−pyridine and acid−amide hydrogen bonds. Synthon energy calculations (Δ E synthon, RHF/6-31G**) explain the observed hydrogen bond preferences in 1:2 (five examples) and 1:1 (two examples) cocrystals. The acid−pyridine hydrogen bond is favored over the acid−amide dimer for strong carboxylic acids because the difference between Δ E acid - pyridine and Δ E acid - amide (−2.21 kcal mol -1 ) is greater than the difference for weak acids (−0.77 kcal mol -1 ), which cocrystallize with both of these hydrogen bond synthons. We suggest Δ E synthon as a semiquantitative parameter to rank hydrogen bond preferences and better understand supramolecular organization in the multifunctional acid−IN system. Melting point alternation in five homologous (diacid)·(IN) 2 cocrystals is correlated with changes in crystal density and packing fraction.
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Research context
OpenAlex topics: Crystallography and molecular interactions · Crystallization and Solubility Studies · Crystal structures of chemical compounds
SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.
Affiliations
School of Chemistry, University of Hyderabad, Hyderabad 500 046, India, and Department of Chemistry and Biochemistry, University of Texas, Austin, Texas 78712
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