journal article·2024Open access

Sepsis Prediction Using CNNBDLSTM and Temporal Derivatives Feature Extraction in the IoT Medical Environment

Sapiah Sakri, Shakila Basheer, Zuhaira Muhammad Zain, Nurul Halimatul Asmak Ismail, Dua’ Abdellatef Nassar, Manal Abdullah Alohali, Mais Ayman Alharaki

Computers, Materials & Continua· Volume 79· Issue 1

Abstract

Background: Sepsis, a potentially fatal inflammatory disease triggered by infection, carries significant health implications worldwide. Timely detection is crucial as sepsis can rapidly escalate if left undetected. Recent advancements in deep learning (DL) offer powerful tools to address this challenge. Aim: Thus, this study proposed a hybrid CNNBDLSTM, a combination of a convolutional neural network (CNN) with a bi-directional long short-term memory (BDLSTM) model to predict sepsis onset. Implementing the proposed model provides a robust framework that capitalizes on the complementary strengths of both architectures, resulting in more accurate and timelier predictions. Method: The sepsis prediction method proposed here utilizes temporal feature extraction to delineate six distinct time frames before the onset of sepsis. These time frames adhere to the sepsis-3 standard requirement, which incorporates 12-h observation windows preceding sepsis onset. All models were trained using the Medical Information Mart for Intensive Care III (MIMIC-III) dataset, which sourced 61,522 patients with 40 clinical variables obtained from the IoT medical environment. The confusion matrix, the area under the receiver operating characteristic curve (AUCROC) curve, the accuracy, the precision, the F1-score, and the recall were deployed to evaluate the models. Result: The CNNBDLSTM model demonstrated superior performance compared to the benchmark and other models, achieving an AUCROC of 99.74% and an accuracy of 99.15% one hour before sepsis onset. These results indicate that the CNNBDLSTM model is highly effective in predicting sepsis onset, particularly within a close proximity of one hour. Implication: The results could assist practitioners in increasing the potential survival of the patient one hour before sepsis onset.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Sepsis Diagnosis and Treatment · Machine Learning in Healthcare · Phonocardiography and Auscultation Techniques

SciVX discovery tags are terminology-based. OpenAlex topics are source-provided classifications.

References (48)

Show source-provided references
1. Sepsis
2. Surviving sepsis campaign: Guidelines on the management of critically ill adults with coronavirus disease 2019 (COVID-19)10.1007/s00134-020-06022-5 ↗
3. Costs and consequences of a novel emergency department sepsis diagnostic test: The intellisep index10.1097/CCE.0000000000000942 ↗
4. Pathophysiology of sepsis10.1097/ACO.0000000000000963 ↗
5. The use of early warning system scores in pre-hospital and emergency department settings to predict clinical deterioration: A systematic review and meta-analysis10.1371/journal.pone.0265559 ↗
6. Mean SOFA score in comparison with APACHE II Score in predicting mortality in surgical patients with sepsis
7. Evaluation of factors associated with survival in allogeneic stem cell-transplanted patients admitted to the intensive care unit (ICU)10.1080/16078454.2023.2256198 ↗
8. The sequential organ failure assessment (SOFA) score: Has the time come for an update?10.1186/s13054-022-04290-9 ↗
9. Host diagnostic biomarkers of infection in the ICU: Where are we and where are we going?10.1007/s11908-021-00747-0 ↗
10. Early warning scores for detecting deterioration in adult hospital patients: Systematic review and critical appraisal of methodology10.1136/bmj.m1501 ↗
11. Artificial intelligence in hematological diagnostics: Game changer or gadget?10.1016/j.blre.2022.101019 ↗
12. Early detection of sepsis with machine learning techniques: A brief clinical perspective10.3389/fmed.2021.617486 ↗
13. Machine learning models for predicting in-hospital mortality in patient with sepsis: Analysis of vital sign dynamics10.3389/fmed.2022.964667 ↗
14. Vital sign-based detection of sepsis in neonates using machine learning10.1111/apa.16660 ↗
15. A time-phased machine learning model for real-time prediction of sepsis in critical care10.1097/CCM.0000000000004494 ↗
16. Evaluating machine learning models for sepsis prediction: A systematic review of methodologies10.1016/j.isci.2021.103651 ↗
17. Improving sepsis prediction performance using conditional recurrent adversarial networks10.1109/ACCESS.2022.3230324 ↗
18. FedSepsis: A federated multi-modal deep learning-based internet of medical things application for early detection of sepsis from electronic health records using raspberry pi and jetson nano devices10.3390/s23020970 ↗
19. Machine learning algorithms for early sepsis detection in the emergency department: A retrospective study10.1016/j.ijmedinf.2022.104689 ↗
20. Comparison of different machine learning algorithms to classify patients suspected of having sepsis infection in the intensive care unit10.1016/j.imu.2023.101236 ↗
21. An explainable artificial intelligence predictor for early detection of sepsis10.1097/CCM.0000000000004550 ↗
22. Early prediction of sepsis from clinical data: The PhysioNet/computing in cardiology challenge 201910.1097/CCM.0000000000004145 ↗
23. Implementation of complementary model using optimal combination of hematological parameters for sepsis screening in patients with fever10.1038/s41598-019-57107-1 ↗
24. Machine learning for prediction of septic shock at initial triage in emergency department10.1016/j.jcrc.2019.09.024 ↗
25. On classifying sepsis heterogeneity in the ICU: Insight using machine learning10.1093/jamia/ocz211 ↗
26. Early prediction of sepsis using double fusion of deep features and handcrafted features10.1007/s10489-022-04425-z ↗
27. MGP-AttTCN: An interpretable machine learning model for the prediction of sepsis10.1371/journal.pone.0251248 ↗
28. An interpretable deep-learning model for early prediction of sepsis in the emergency department10.1016/j.patter.2020.100196 ↗
29. DeepAISE–An interpretable and recurrent neural survival model for early prediction of sepsis10.1016/j.artmed.2021.102036 ↗
30. A deep learning approach for sepsis monitoring via severity score estimation10.1016/j.cmpb.2020.105816 ↗
31. Towards early sepsis detection from measurements at the general ward through deep learning
32. SSP: Early prediction of sepsis using fully connected LSTM-CNN model10.1016/j.compbiomed.2020.104110 ↗
33. A deep learning-based sepsis estimation scheme10.1109/ACCESS.2020.3043732 ↗
34. Machine learning for early detection of sepsis: An internal and temporal validation study10.1093/jamiaopen/ooaa006 ↗
35. Early detection of sepsis utilizing deep learning on electronic health record event sequences10.1016/j.artmed.2020.101820 ↗
36. Artificial intelligence in sepsis early prediction and diagnosis using unstructured data in healthcare10.1038/s41467-021-20910-4 ↗
37. Peeking into a black box, the fairness and generalizability of a MIMIC-III benchmarking model10.1038/s41597-021-01110-7 ↗
38. A machine learning sepsis prediction algorithm for intended intensive care unit use (NAVOY Sepsis): Proof-of-concept study10.2196/28000 ↗
39. Sepsis: Diagnosis and management
40. A novel solution of using deep learning for early prediction cardiac arrest in Sepsis patient: Enhanced bidirectional long short-term memory (LSTM)10.1007/s11042-021-11176-5 ↗
41. A new convolutional neural network-construct for sepsis enhances pattern identification of microcirculatory dysfunction
42. Exploring a global interpretation mechanism for deep learning networks when predicting sepsis10.1038/s41598-023-30091-3 ↗
43. Sepsis detection using extreme gradient boost (XGB): A supervised learning approach
44. Identification of potential diagnostic and prognostic biomarkers for sepsis based on machine learning10.1016/j.csbj.2023.03.034 ↗
45. A comparison of resampling techniques for medical data using machine learning10.1142/S021964922040016X ↗
46. Multiclass confusion matrix reduction method and its application on net promoter score classification problem
47. From local explanations to global understanding with explainable AI for trees10.1038/s42256-019-0138-9 ↗
48. HealthGuard: An intelligent healthcare system security framework based on machine learning10.3390/su141911934 ↗