journal article·2023Open access

Application of the Deep Convolutional Neural Network for the Classification of Auto Immune Diseases

Fayaz Muhammad, Jahangir Khan, Asad Ullah, Fasee Ullah, Razaullah Khan, Inayat Khan, Mohammed ElAffendi, Gauhar Ali

Computers, Materials & Continua· Volume 77· Issue 1

Abstract

IIF (Indirect Immune Florescence) has gained much attention recently due to its importance in medical sciences. The primary purpose of this work is to highlight a step-by-step methodology for detecting autoimmune diseases. The use of IIF for detecting autoimmune diseases is widespread in different medical areas. Nearly 80 different types of autoimmune diseases have existed in various body parts. The IIF has been used for image classification in both ways, manually and by using the Computer-Aided Detection (CAD) system. The data scientists conducted various research works using an automatic CAD system with low accuracy. The diseases in the human body can be detected with the help of Transfer Learning (TL), an advanced Convolutional Neural Network (CNN) approach. The baseline paper applied the manual classification to the MIVIA dataset of Human Epithelial cells (HEP) type II cells and the Sub Class Discriminant (SDA) analysis technique used to detect autoimmune diseases. The technique yielded an accuracy of up to 90.03%, which was not reliable for detecting autoimmune disease in the mitotic cells of the body. In the current research, the work has been performed on the MIVIA data set of HEP type II cells by using four well-known models of TL. Data augmentation and normalization have been applied to the dataset to overcome the problem of overfitting and are also used to improve the performance of TL models. These models are named Inception V3, Dens Net 121, VGG-16, and Mobile Net, and their performance can be calculated through parameters of the confusion matrix (accuracy, precision, recall, and F1 measures). The results show that the accuracy value of VGG- 16 is 78.00%, Inception V3 is 92.00%, Dense Net 121 is 95.00%, and Mobile Net shows 88.00% accuracy, respectively. Therefore, DenseNet-121 shows the highest performance with suitable analysis of autoimmune diseases. The overall performance highlighted that TL is a suitable and enhanced technique compared to its counterparts. Also, the proposed technique is used to detect autoimmune diseases with a minimal margin of errors and flaws.
Source: openalex_inverted_index · Quality: baseline

Research context

OpenAlex topics: Traditional Chinese Medicine Studies

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References (38)

Show source-provided references
1. Anti-nuclear antibodies in healthy people and non-rheumatic diseases-diagnostic and clinical implications10.5114/reum.2018.77976 ↗
2. International recommendations for the assessment of autoantibodies to cellular antigens referred to as anti-nuclear antibodies10.1136/annrheumdis-2013-203863 ↗
3. Automated antinuclear immune of fluorescence antibody screening: A comparative study of six computer-aided diagnostic systems10.1016/j.autrev.2013.10.015 ↗
4. Challenges of automated screening and differentiation of non-organ specific autoantibodies on HEp-2 cells10.1016/j.autrev.2009.02.033 ↗
5. Novel opportunities in automated classification of antinuclear antibodies on HEp-2 cells10.1016/j.autrev.2011.04.022 ↗
6. Introducing Urdu digits dataset with demonstration of an efficient and robust noisy decoder-based pseudo example generator10.3390/sym14101976 ↗
7. Automated approach for indirect immunofluorescence images classification based on unsupervised clustering method10.1049/iet-cvi.2018.5271 ↗
8. Cascio · 2014 · 10
9. Computer-assisted classification patterns in autoimmune diagnostics: The AIDA Project10.1155/2016/2073076 ↗
10. Chest pathology detection using deep learning with non-medical training
11. Deep convolutional neural networks for computer-aided detection: CNN architectures, dataset characteristics and transfer learning10.1109/TMI.2016.2528162 ↗
12. Multi-class texture analysis in colorectal cancer histology10.1038/srep27988 ↗
13. Combining convolutional and recurrent neural networks for human skin detection10.1109/LSP.2017.2654803 ↗
14. Image analysis and machine learning for detecting malaria10.1016/j.trsl.2017.12.004 ↗
15. Chelghoum · IFIP Advances in Information and Communication Technology · 2020 · 189
16. Exploring the efficacy of transfer learning in mining image-based software artifacts10.1186/s40537-020-00335-4 ↗
17. Farooqi · Applications of Intelligent Technologies in Healthcare · 2018 · 14 · 143
18. Transfer learning based histopathologic image classification for breast cancer detection10.1007/s13755-018-0057-x ↗
19. Subclass discriminant analysis of morphological and textural features for HEp-2 staining pattern classification10.1016/j.patcog.2013.09.024 ↗
20. Brain tumor classification using deep CNN features via transfer learning10.1016/j.compbiomed.2019.103345 ↗
21. Brain tumor classification for MR images using transfer learning and fine-tuning10.1016/j.compmedimag.2019.05.001 ↗
22. An efficient and reliable algorithm for wireless sensor network10.3390/s21248355 ↗
23. Detecting coronavirus from chest X-rays using transfer learning10.3390/covid1010034 ↗
24. Deep residual learning for image recognition
25. Application of internet of things and sensors in healthcare10.3390/s22155738 ↗
26. ImageNet classification with deep convolutional neural networks10.1145/3065386 ↗
27. Going deeper with convolutions
28. Deep residual learning for image recognition
29. EURO pattern suite technology for computer-aided immunofluorescence microscopy in autoantibody diagnostics10.1177/0961203314559635 ↗
30. Deep CNN for IIF images classification in autoimmune diagnostics10.3390/app9081618 ↗
31. Computer aided diagnosis for anti-nuclear antibodies HEp-2 images: Progress and challenges10.1016/j.patrec.2016.06.013 ↗
32. An automatic HEp-2 specimen analysis system based on an active contours model and an SVM classification10.3390/app9020307 ↗
33. An automated pattern recognition system for classifying indirect immunofluorescence images of HEp-2 cells and specimens10.1016/j.patcog.2015.09.015 ↗
34. HEp-2 cell classification using shape index histograms with donut-shaped spatial pooling10.1109/TMI.2014.2318434 ↗
35. Accurate HEp-2 cell classification based on sparse coding of superpixels10.1016/j.patrec.2016.02.007 ↗
36. González · Image Enhancement with Matlab Algorithms · 2016 · 79
37. Childhood pneumonia recognition using convolutional neural network from chest X-ray images
38. Learning performance of convolutional neural networks with different pooling models