journal article·2026-02-24Open access

Hierarchical Self-Assembly of Disulfide-Linked Single-Stranded DNA into Stimuli-Responsive Pods

Volkan Kilinc, Linawati Sutrisno, Joel Henzie, Emmanuel Picheau, Yusuke Yamauchi, Katsuhiko Ariga, Jonathan P. Hill

Chemistry of Materials· Volume 38· Issue 4

Abstract

High Resolution Image Download MS PowerPoint Slide Controlling the large-scale assembly of charged biopolymers is a fundamental challenge in materials chemistry. Here, we report a chemical strategy that uses disulfide-linked single-stranded DNA (ssDNA) dimers as unique building blocks to drive the hierarchical self-assembly of functional DNA microstructures. Formed from short, random-sequence oligomers, these dimers first organize into DNA-salt composite nanobead condensates, which then serve as scaffolds for the assembly of uniform, microrod-shaped DNA condensates called DNA-pod condensates. The key innovation of this work is the material’s unique, cooperative structural transition. Upon thermal stimulation (>60 °C), dsDNA-pod condensates undergo a rapid exfoliation into an expanded ssDNA network, a process driven by significant gains in configurational entropy and the relief of electrostatic repulsion. This establishes an accessible strategy for creating stimuli-responsive DNA materials through a chemistry-driven, sequence-independent pathway. We further demonstrate that these materials act as robust host matrices for encapsulating guest molecules like doxorubicin.
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Research context

OpenAlex topics: Advanced biosensing and bioanalysis techniques · Supramolecular Self-Assembly in Materials · DNA and Nucleic Acid Chemistry

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Affiliations

Research Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan

Australian Institute for Bioengineering and Nanotechnology (AIBN)

The University of Queensland

Department of Advanced Materials Process Engineering, Graduate School of Engineering

Nagoya University

Department of Chemical and Biomolecular Engineering, Yonsei University, Yonsei-Ro, Seodaemun-Gu, Seoul 03722, South Korea

Graduate School of Frontier Sciences

The University of Tokyo

Funding

Ministry of Education, Culture, Sports, Science and Technology · Australian National Fabrication Facility

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